BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB009B04SP1|AL425980
(849 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1439 1680 0.0
>3x_Contig1439
Length = 7662
Score = 1680 bits (847), Expect = 0.0
Identities = 848/849 (99%)
Strand = Plus / Plus
Query: 1 ccgttatcaaactataacgtaattaccactattagaccctagttgatcgtctgahacacg 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 786 ccgttatcaaactataacgtaattaccactattagaccctagttgatcgtctgaaacacg 845
Query: 61 gtatgacggcctgaataaacctctgttttatcatttccatccttaaaggttataatctgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 846 gtatgacggcctgaataaacctctgttttatcatttccatccttaaaggttataatctgg 905
Query: 121 cgaacttggccttttcagattatttttttccgggttttgactatataaagactaagagta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 906 cgaacttggccttttcagattatttttttccgggttttgactatataaagactaagagta 965
Query: 181 ttaaaaggtttcagtaagactgttaaaaaaccttaaaaacttcaaatctggatagcttac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 966 ttaaaaggtttcagtaagactgttaaaaaaccttaaaaacttcaaatctggatagcttac 1025
Query: 241 cgtgcttactttcgtatttagattaactagttgaaaactgataagaggtgttactgtttt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1026 cgtgcttactttcgtatttagattaactagttgaaaactgataagaggtgttactgtttt 1085
Query: 301 taagttttaaaacataatgaaggttgctgtgattggtgctaatggtaaagtcggtagact 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1086 taagttttaaaacataatgaaggttgctgtgattggtgctaatggtaaagtcggtagact 1145
Query: 361 cgtttgtgacaaattaaaaaaggttgataattatgatccggttgcttttgttcgtactga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1146 cgtttgtgacaaattaaaaaaggttgataattatgatccggttgcttttgttcgtactga 1205
Query: 421 agagcaagtgaaatatttcaagaatgaagttggcattgacgttacattaaccagtgttga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1206 agagcaagtgaaatatttcaagaatgaagttggcattgacgttacattaaccagtgttga 1265
Query: 481 ggatagtacagttggtcagattgccgaagctttcaaaaagcataaaattgaagctgttgt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1266 ggatagtacagttggtcagattgccgaagctttcaaaaagcataaaattgaagctgttgt 1325
Query: 541 attcagtgccggagcaggtggtaagagcattgaaagaatatttacagttgatttagatgg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1326 attcagtgccggagcaggtggtaagagcattgaaagaatatttacagttgatttagatgg 1385
Query: 601 atgctgcaaagtagcagacgcctgcgaggaggccaatatttccaggttcatcgtagtttc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1386 atgctgcaaagtagcagacgcctgcgaggaggccaatatttccaggttcatcgtagtttc 1445
Query: 661 tgctataaaggcagaagaccgtactttctggtatgacactgctttgcgtaattactacat 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1446 tgctataaaggcagaagaccgtactttctggtatgacactgctttgcgtaattactacat 1505
Query: 721 tgctaaaaacgctgcagatcattacgtgagaggaaccaacctaaactatacaatcttaca 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1506 tgctaaaaacgctgcagatcattacgtgagaggaaccaacctaaactatacaatcttaca 1565
Query: 781 gccagggatgttggaaaccggcaagtcaactggtaaattatgtaccttggatcttcttga 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1566 gccagggatgttggaaaccggcaagtcaactggtaaattatgtaccttggatcttcttga 1625
Query: 841 gacaaagaa 849
|||||||||
Sbjct: 1626 gacaaagaa 1634
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6558
Number of Sequences: 1807
Number of extensions: 6558
Number of successful extensions: 47
Number of sequences better than 1.0e-20: 1
length of query: 849
length of database: 10,358,551
effective HSP length: 16
effective length of query: 833
effective length of database: 10,329,639
effective search space: 8604589287
effective search space used: 8604589287
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)